Showing : flow Cytometry • reset
0
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880
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namespace conflict flowAI and ggCyto
software error flow cytometry ggcyto flowAI
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by ▴ 70
5
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4
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1.5k
views
ggcyto wrong axis scale?
ggcyto flowWorkspace flow cytometry flowjo
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by ▴ 10
3
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10
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2.3k
views
Reading multiple data segments from FCS 3.0 file
flowCore flow cytometry FCS 3.0 ncdfFlowSet
updated 23 months ago by ▴ 350 • written 4.0 years ago by ▴ 30
2
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4
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1.1k
views
Mathematical operations in FCS file
flowCore flow cytometry
4.4 years ago chandra.swarnendu • 0
0
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7
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1.8k
views
Issue with flowAI and flow_auto_qc
flowAI flow_auto_qc QC flow cytometry
updated 4.5 years ago by • 0 • written 4.5 years ago by • 0
4
votes
4
replies
1.3k
views
FCSTransTransform() implementation in flowCore
flowCore FCSTrans flow cytometry
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by ▴ 80
1
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3
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1.2k
views
Cannot inverse transform GatingSet
flowworkspace flow cytometry flow workspace
updated 5.0 years ago by ▴ 310 • written 5.0 years ago by • 0
0
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0
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737
views
flowPloidy: how to visualize data on logarythmic x axis
flowPloidy flowcore flow cytometry
5.1 years ago kovacik • 0
1
vote
5
replies
1.7k
views
Flow cytometry optimization of transformation parameters
flow Cytometry flowCore flowTrans
5.1 years ago carlos.x.martinez-fleites • 0
2
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5
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1.3k
views
flowCore filterSummary toTable() function not working
flowCore flowcore flow cytometry
updated 5.2 years ago by ▴ 310 • written 5.2 years ago by • 0
3
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3
replies
1.1k
views
ncdfFlowSet with dim=3
ncdfflow flow cytometry
updated 5.3 years ago by ★ 1.3k • written 5.3 years ago by ▴ 30
0
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2
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1.1k
views
flowCore: retain raw data in the flowset after transformation
flow cytometry flowcore
updated 5.3 years ago by ★ 1.3k • written 5.3 years ago by • 0
3
votes
3
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1.7k
views
Opencyto - detector name not found in flow data, but pretty sure it's there
opencyto flowcore flow cytometry
updated 5.6 years ago by ★ 1.3k • written 6.5 years ago by ▴ 10
3
votes
3
replies
3.3k
views
Modifying or writing a FCS file in R using the FlowCore package
FCS flowframe flowcore flow cytometry
5.7 years ago vonskopnik ▴ 10
0
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1
reply
1.1k
views
How do I apply a singleParameterTransform to a number of parameters in a flowFrame like the standard transforms?
flowcore flow cytometry flowdensity hyperlog transformation
updated 5.7 years ago by ★ 1.3k • written 5.7 years ago by • 0
1
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3
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4.7k
views
Load FlowCore to read .fcs files in R
flowcore flow cytometry R
5.9 years ago Bayram Sarilmaz • 0
2
votes
5
replies
1.8k
views
How to identify multiple datasets in FCS file through flowCore
flowcore flow cytometry dataset
6.0 years ago vinko.tosevski • 0
0
votes
3
replies
1.6k
views
Spillover matrix in FlowCore doesn't match Compensation Matrix from FlowJo
spillover flowcore compensation matrix bioconductor flow cytometry
6.2 years ago Samuel Ahuno • 0
2
votes
4
replies
2.8k
views
Exporting FCS from FlowJo for flowCore & cytofkit analysis
flowcore flow cytometry cytofkit
updated 6.2 years ago by ▴ 350 • written 6.2 years ago by ▴ 10
1
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2
replies
1.4k
views
How do you re-order .fcs files in a flowSet?
flowcore flowset bioconductor flow cytometry fcs file
6.2 years ago Samuel Ahuno • 0
0
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0
replies
651
views
Extracting matched cluster IDs in flowMatch
flowMatch flow cytometry
6.2 years ago vinko.tosevski • 0
0
votes
1
reply
980
views
spillover::flowCore problem: Error: Unable to match stains with controls based on intensity: a single stain matches to several multiple controls.
flowCore spillover compensation matrix bioconductor flow cytometry
6.2 years ago Samuel Ahuno • 0
1
vote
2
replies
1.4k
views
flowCore estimate logicle - error in getChannelMarker
flowcore flow cytometry transformation
updated 6.4 years ago by ▴ 350 • written 6.4 years ago by ▴ 10
1
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3
replies
1.3k
views
Please help me verify my compensation and spill matrices makes sense ( openCyto package, in flowCore )
flow cytometry flowcore spillover compensation matrix
updated 6.6 years ago by ▴ 350 • written 6.6 years ago by ▴ 20
1
vote
1
reply
1.0k
views
Using inverse logicle in flowCore
flowCore logicle transformation flow cytometry
updated 6.6 years ago by ★ 1.3k • written 6.6 years ago by ▴ 10
0
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1
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1.2k
views
can a function outliers be applied for a flowframe?
bioconductor flow cytometry rstudio
updated 6.9 years ago by ▴ 350 • written 6.9 years ago by • 0
7
votes
11
replies
16k
views
Error: package or namespace load failed for...
package installation flowviz flowcore rcpp flow cytometry
updated 7.0 years ago by 25k • written 7.0 years ago by ▴ 50
1
vote
1
reply
2.0k
views
Loading FCS files
FCS flow cytometry bioconductor phenoData Loading Data
updated 7.3 years ago by ▴ 350 • written 7.3 years ago by • 0
0
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1
reply
1.1k
views
Transform data from MoFlo Astrios
transform flow cytometry data
updated 7.3 years ago by ▴ 350 • written 7.3 years ago by • 0
0
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0
replies
1.3k
views
Flow cytometry compensation in R
flow cytometry compensation R
7.5 years ago akisheev89 • 0
1
vote
7
replies
1.7k
views
segmentation faults flowMeans and flowStats
flowstats flow cytometry
7.5 years ago frederiekmaarten.kerckhof ▴ 10
0
votes
6
replies
1.6k
views
Error biexponential transform flowTrans
flowtrans flow cytometry flowcore
updated 7.6 years ago by ★ 1.3k • written 7.6 years ago by • 0
0
votes
4
replies
1.8k
views
flowCore question regarding to the data range
flowcore flow cytometry
updated 7.8 years ago by • 0 • written 7.8 years ago by ★ 1.3k
0
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1
reply
1.2k
views
using flowIncubator package's function
opencyto flow cytometry R package installation
updated 7.8 years ago by ★ 1.3k • written 7.8 years ago by • 0
1
vote
3
replies
1.9k
views
flowViz and grid
flowcore flowviz flow cytometry
updated 7.8 years ago by ★ 1.3k • written 7.8 years ago by ▴ 70
0
votes
1
reply
1.4k
views
How to manually set base landmark in flowStats gaussNorm
flow cytometry flowstats gaussnorm issues
7.9 years ago Jiang, Mike ★ 1.3k
1
vote
5
replies
1.8k
views
openCyto - flowclust.2d throws errors
opencyto flow cytometry
updated 8.0 years ago by • 0 • written 8.0 years ago by ▴ 30
1
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1
reply
1.1k
views
OpenCyto -- time gate and border events
opencyto gating flowcore flow cytometry
updated 8.0 years ago by ★ 1.3k • written 8.0 years ago by ▴ 30
1
vote
6
replies
3.0k
views
Errors in creating a flowSet from fcs files
flowcore flowstats flow cytometry read.flowset()
updated 8.0 years ago by ★ 1.3k • written 8.0 years ago by • 0
0
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0
replies
1.7k
views
Creating a flowSet
flowcore flow cytometry flowstats read.flowset()
8.0 years ago mbxtp1 • 0
0
votes
1
reply
902
views
How to analyse flowdata staring with the fcs files till the end?
flow cytometry
updated 8.4 years ago by 16k • written 8.4 years ago by • 0
2
votes
2
replies
1.8k
views
How to FlowCore
flowcore flow cytometry
updated 8.4 years ago by ★ 1.3k • written 8.4 years ago by • 0
1
vote
1
reply
1.5k
views
Understanding Flow cytometry data
flow cytometry flowcore flowclean rflowcyt flowworkspace
updated 8.4 years ago by ★ 1.3k • written 8.4 years ago by • 0
0
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0
replies
1.5k
views
flowWorkspace and ggcyto
flowworkspace flow cytometry visualization
8.8 years ago Jiang, Mike ★ 1.3k
1
vote
0
replies
1.2k
views
writing out FCS files then reading them back in
flowcore flow cytometry
8.8 years ago Jiang, Mike ★ 1.3k
0
votes
0
replies
1.0k
views
xyplot of flowViz
flowviz flow cytometry
8.8 years ago Jiang, Mike ★ 1.3k
0
votes
0
replies
1.5k
views
On boolean combinations (flowWorkspace)
flowworkspace flow cytometry
8.9 years ago Jiang, Mike ★ 1.3k
0
votes
0
replies
971
views
readFCS truncates the data that is out of instrument range
flowcore flow cytometry
8.9 years ago Jiang, Mike ★ 1.3k
0
votes
0
replies
1.4k
views
openCyto transitional gate
flow cytometry opencyto
9.1 years ago Jiang, Mike ★ 1.3k
3
votes
2
replies
1.7k
views
How are autofluorescence values used in the spillover/compensate functions?
flowcore flow cytometry compensation spillover
updated 9.1 years ago by ▴ 150 • written 9.1 years ago by ▴ 20
50 results • Page 1 of 1
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Comment: Too many significant genes when integrating gtex and tcga by ATpoint ★ 4.1k
These two datasets are from completely different experiments / batches. It is utterly meaningless to compare them. I would suggest comparat…
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Set a fixed seed before running this. Note that a FDR of 0.25 in fgsea is wildly and overly lenient. See https://support.bioconductor.o…
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Hi Michael, I think there is something wrong with the generation of nullranges. I was working with small RNA and methylation overlaps. …
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Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
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I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
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Answer: limma Intercept vs No-intercept models completely changing DMR results?
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